Human (GRCh38.p14)
Description

orthodenticle homeobox 1 [Source:HGNC Symbol;Acc:HGNC:8521]

Location
About this transcript

This transcript has 5 exons, is annotated with 1 domain and feature, is associated with 3033 variant alleles and maps to 370 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000282549.7OTX1-2012828354aaENSP00000282549.2
 
Protein coding
CCDS1873P32242 NM_014562.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000366671.7OTX1-2022861354aaENSP00000355631.3
 
Protein coding
CCDS1873P32242 -GENCODE basicAPPRIS P1TSL:3
ENST00000405984.8OTX1-2031694101aaENSP00000385782.4
 
Nonsense mediated decay
B5MC54 -TSL:2
ENST00000484066.2OTX1-2061244No protein-
 
Retained intron
--TSL:3
ENST00000477348.1OTX1-205624No protein-
 
Retained intron
--TSL:3
ENST00000476383.1OTX1-204564No protein-
 
Retained intron
--TSL:4
Statistics

Exons: 5, Coding exons: 2, Transcript length: 1,694 bps, Translation length: 101 residues

Transcript Support Level (TSL)

TSL:2

Version

ENST00000405984.8

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.