Description

lymphotoxin beta receptor (TNFR superfamily, member 3) [Source:HGNC Symbol;Acc:6718]

Location
Gene

This transcript is a product of gene ENSG00000111321

This gene has 15 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
LTBR-001ENST000002289182260ENSP00000228918435Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS8544YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
LTBR-003ENST000005399251665ENSP00000440875416Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS59233YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
LTBR-010ENST000005411021084ENSP00000438605292Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
LTBR-014ENST00000536876842ENSP00000437647218Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
LTBR-012ENST00000543190785ENSP0000043895574Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
LTBR-006ENST00000544454632ENSP00000437954148Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
LTBR-004ENST00000546296783No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
LTBR-008ENST00000541005583No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
LTBR-005ENST00000542830539No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
LTBR-007ENST00000543542367No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
LTBR-009ENST000004410742323No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
LTBR-002ENST000004448141553No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
LTBR-013ENST00000535739928No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
LTBR-011ENST00000440421729No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
LTBR-015ENST00000545445379No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 10 Coding exons: 10 Transcript length: 1,665 bps Translation length: 416 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS59233

Ensembl version

ENST00000539925.1

Type

Novel protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000399421 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays