Description

lymphotoxin beta receptor (TNFR superfamily, member 3) [Source:HGNC Symbol;Acc:HGNC:6718]

Synonyms

D12S370, TNF-R-III, TNFCR, TNFR-RP, TNFR2-RP, TNFRSF3

AD023, MGC45027, MIFD

Location
Gene

This transcript is a product of gene ENSG00000111321

This gene has 15 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
LTBR-001ENST000002289182260 bp435 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8544B3KTD9 P36941 Q75UT6
NM_002342
NP_002333
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LTBR-003ENST000005399251665 bp416 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS59233B3KTD9 P36941 NM_001270987
NP_001257916
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LTBR-010ENST000005411021084 bp292 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5H2E7 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LTBR-014ENST00000536876842 bp218 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5H6F8 Q75UT6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
LTBR-012ENST00000543190785 bp74 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5H1S5 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
LTBR-006ENST00000544454632 bp148 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F5H627 -
LTBR-004ENST00000546296783 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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LTBR-005ENST00000542830539 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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LTBR-009ENST000004410742327 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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LTBR-002ENST000004448141553 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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LTBR-013ENST00000535739928 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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LTBR-011ENST00000440421729 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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LTBR-008ENST00000541005583 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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LTBR-015ENST00000545445379 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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LTBR-007ENST00000543542367 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 10 Coding exons: 10 Transcript length: 2,260 bps Translation length: 435 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS8544

Uniprot

This transcript corresponds to the following Uniprot identifiers: P36941

Ensembl version

ENST00000228918.5

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays