Human (GRCh38.p14)
Description

pre-mRNA processing factor 40 homolog B [Source:HGNC Symbol;Acc:HGNC:25031]

Gene Synonyms

HYPC

Location
About this transcript

This transcript has 26 exons, is annotated with 70 domains and features, is associated with 9273 variant alleles and maps to 516 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000548825.7PRPF40B-2093182892aaENSP00000448073.2
 
Protein coding
CCDS31796F8VU11 NM_001031698.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3TSL:5
ENST00000261897.5PRPF40B-2013602858aaENSP00000261897.1
 
Protein coding
Q6NWY9-2 -GENCODE basicTSL:1
ENST00000380281.6PRPF40B-2023311893aaENSP00000369634.2
 
Protein coding
CCDS86298A0A8Z5ADK7 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000551063.5PRPF40B-2115316aaENSP00000449569.1
 
Protein coding
--TSL:4CDS 3' incomplete
ENST00000549547.1PRPF40B-210697137aaENSP00000449485.1
 
Nonsense mediated decay
H0YII7 -TSL:5CDS 5' incomplete
ENST00000508736.1PRPF40B-2031861No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000552301.1PRPF40B-216912No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000547764.1PRPF40B-206803No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000527253.2PRPF40B-204742No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000548436.5PRPF40B-2082059No protein-
 
Retained intron
--TSL:2
ENST00000551111.1PRPF40B-2121061No protein-
 
Retained intron
--TSL:5
ENST00000551269.1PRPF40B-213923No protein-
 
Retained intron
--TSL:3
ENST00000546626.1PRPF40B-205630No protein-
 
Retained intron
--TSL:3
ENST00000551418.5PRPF40B-215583No protein-
 
Retained intron
--TSL:5
ENST00000551320.1PRPF40B-214455No protein-
 
Retained intron
--TSL:2
ENST00000548399.1PRPF40B-207455No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 26, Coding exons: 26, Transcript length: 3,182 bps, Translation length: 892 residues

MANE

This MANE Select transcript contains ENSP00000448073 and matches to NM_001031698.3 and NP_001026868.2

CCDS

This transcript is a member of the Human CCDS set: CCDS31796

Transcript Support Level (TSL)

TSL:5

Version

ENST00000548825.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.