Description

aryl hydrocarbon receptor interacting protein [Source:HGNC Symbol;Acc:HGNC:358]

Synonyms

ARA9, FKBP16, XAP2

Location
Gene

This transcript is a product of gene ENSG00000110711

This gene has 4 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
AIP-001ENST000002791461221330 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8168A3RDR8 A7KS93 A7KS94
A7YDK1 A7YDK2 A7YDK6
A8BQF1 AIP-001 B3TMT2
D0EKE5 E5L4L0 G9I2H4
O00170
NM_003977
NP_003968
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
AIP-006ENST00000528641815232 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A3RDR8 A7KS93 A7KS94
A7YDK1 A7YDK2 A8BQF1
AIP-006 B3TMT2 E5L4L0
E9PMH2
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

AIP-005ENST00000525341635188 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A7KS93 A7KS94 A7YDK4
AIP-005 V9GYQ3
-CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

AIP-003ENST00000529797801No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
-AIP-003 -TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 6 Coding exons: 6 Transcript length: 1,221 bps Translation length: 330 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS8168

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00170

Transcript Support Level

1

Ensembl version

ENST00000279146.5

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays