Description

aryl hydrocarbon receptor interacting protein [Source:HGNC Symbol;Acc:HGNC:358]

Synonyms

ARA9, FKBP16, XAP2

Location
About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 196 variations and maps to 11 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
AIP-001ENST000002791461221330aaENSP00000279146
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8168G9I2H4 O00170 NM_001302960
NM_003977
NP_001289889
NP_003968
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
AIP-006ENST00000528641815232aaENSP00000434982
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PMH2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

AIP-005ENST00000525341635188aaENSP00000476993
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-V9GYQ3 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

AIP-003ENST00000529797801No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 6 Coding exons: 6 Transcript length: 1,221 bps Translation length: 330 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS8168

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00170

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000279146.6

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays