Description

SRY (sex determining region Y)-box 6 [Source:HGNC Symbol;Acc:16421]

Location
Gene

This transcript is a product of gene ENSG00000110693

This gene has 18 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
SOX6-202ENST000003963568865ENSP00000379644808Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS7821YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SOX6-001ENST000003163998808ENSP00000324948808Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS7821YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SOX6-002ENST000005282522707ENSP00000432134801Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS53604YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SOX6-003ENST000005276192699ENSP00000434455804Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS53605YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SOX6-201ENST000003520838925ENSP00000339876828Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SOX6-012ENST000005284292656ENSP00000433233828Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SOX6-009ENST00000533411586ENSP00000436170159Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
SOX6-008ENST00000529469549ENSP0000043259679Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
SOX6-010ENST00000526673534ENSP00000434892139Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
SOX6-011ENST000005303781818ENSP00000432577159Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
SOX6-006ENST000005336581198No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
SOX6-015ENST00000524520709No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
SOX6-017ENST00000525835660No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
SOX6-007ENST00000527840574No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
SOX6-016ENST00000525259574No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
SOX6-013ENST00000524650534No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
SOX6-014ENST00000531297429No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.---
SOX6-005ENST000005338707224No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 15 Coding exons: 14 Transcript length: 2,707 bps Translation length: 801 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS53604

Ensembl version

ENST00000528252.1

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000386809 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays