Description

SRY (sex determining region Y)-box 6 [Source:HGNC Symbol;Acc:HGNC:16421]

Synonyms

Location
Gene

This transcript is a product of gene ENSG00000110693

This gene has 17 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
SOX6-201ENST000003963568865 bp808 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7821E9PN02 E9PQ67 E9PQL4
P35712
NM_033326
NP_201583
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SOX6-001ENST000003163998808 bp808 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7821E9PN02 E9PQ67 E9PQL4
P35712
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SOX6-002ENST000005282522707 bp801 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS53604E9PN02 E9PQ67 E9PQL4
P35712
NM_001145811
NP_001139283
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SOX6-003ENST000005276192699 bp804 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS53605E9PN02 E9PQ67 E9PQL4
P35712
NM_017508
NP_059978
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SOX6-012ENST000005284292656 bp828 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PN02 E9PQ67 E9PQL4
P35712
NM_001145819
NP_001139291
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SOX6-009ENST00000533411586 bp159 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PN02 E9PQ67 E9PQL4
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SOX6-008ENST00000529469549 bp79 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PQ67 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SOX6-010ENST00000526673534 bp139 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9PN02 E9PQ67 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SOX6-011ENST000005303781818 bp159 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-E9PN02 E9PQ67 E9PQ78
-
SOX6-006ENST000005336581202 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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SOX6-015ENST00000524520709 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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SOX6-017ENST00000525835660 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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SOX6-007ENST00000527840574 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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SOX6-016ENST00000525259574 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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SOX6-013ENST00000524650534 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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SOX6-014ENST00000531297429 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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SOX6-005ENST000005338707224 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 16 Coding exons: 15 Transcript length: 8,865 bps Translation length: 808 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS7821

Uniprot

This transcript corresponds to the following Uniprot identifiers: P35712

Ensembl version

ENST00000396356.4

Type

Known protein coding

Prediction Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays