Description

apolipoprotein A-V [Source:HGNC Symbol;Acc:HGNC:17288]

Synonyms

APOA-V, RAP3

About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 136 variations and maps to 11 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
APOA5-201ENST000005424991929366aaENSP00000445002
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8376Q6Q788 NM_001166598
NM_052968
NP_001160070
NP_443200
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
APOA5-001ENST000002276651897366aaENSP00000227665
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8376Q6Q788 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
APOA5-002ENST00000433069526162aaENSP00000399701
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JZZ0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 4 Coding exons: 3 Transcript length: 1,929 bps Translation length: 366 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS8376

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6Q788

Transcript Support Level (TSL)

TSL:5

Ensembl version

ENST00000542499.4

Type

Known protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays