Description

zinc finger and BTB domain containing 16 [Source:HGNC Symbol;Acc:HGNC:12930]

Synonyms

PLZF, ZNF145

Gene

This transcript is a product of gene ENSG00000109906

This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
ZBTB16-001ENST000003359532523 bp673 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8367F5H5Y7 F5H6C3 Q05516
Q71UL5 Q71UL6 Q71UL7
NM_006006
NP_005997
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ZBTB16-003ENST000003929962287 bp673 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8367F5H5Y7 F5H6C3 Q05516
Q71UL5 Q71UL6 Q71UL7
NM_001018011
NP_001018011
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ZBTB16-004ENST00000544220773 bp115 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5H6C3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
ZBTB16-005ENST00000535700572 bp148 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F5H5Y7 F5H6C3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
ZBTB16-006ENST00000539918757 bp55 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
ZBTB16-008ENST00000535379705 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
ZBTB16-007ENST00000545851534 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
ZBTB16-002ENST000005416024427 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
ZBTB16-009ENST00000535509727 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 7 Coding exons: 6 Transcript length: 2,287 bps Translation length: 673 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS8367

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q05516

Ensembl version

ENST00000392996.2

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays