Description

crystallin, alpha B [Source:HGNC Symbol;Acc:HGNC:2389]

Synonyms

CRYA2, HSPB5

Gene

This transcript is a product of gene ENSG00000109846

This gene has 16 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
CRYAB-002ENST000005334751119175 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8351A0A024R3B9 CRYAB-002 E9PJL7
E9PNH7 E9PR44 E9PRS4
E9PS12 P02511 V9HW27
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI3APPRIS candidate principal isoform (CCDS) [01-09-2014]
Glossary entry for APPRIS
APPRIS website
CRYAB-001ENST000005261801017175 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8351A0A024R3B9 CRYAB-001 E9PJL7
E9PNH7 E9PR44 E9PRS4
E9PS12 P02511 V9HW27
NM_001289807
NM_001289808
NM_001885
NP_001276736
NP_001276737
NP_001876
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI3APPRIS candidate principal isoform (CCDS) [01-09-2014]
Glossary entry for APPRIS
APPRIS website
CRYAB-015ENST000005311981013175 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8351A0A024R3B9 CRYAB-015 E9PJL7
E9PNH7 E9PR44 E9PRS4
E9PS12 P02511 V9HW27
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI3APPRIS candidate principal isoform (CCDS) [01-09-2014]
Glossary entry for APPRIS
APPRIS website
CRYAB-201ENST00000616970977175 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8351A0A024R3B9 CRYAB-201 E9PJL7
E9PNH7 E9PR44 E9PRS4
E9PS12 V9HW27
-TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI3APPRIS candidate principal isoform (CCDS) [01-09-2014]
Glossary entry for APPRIS
APPRIS website
CRYAB-013ENST00000527950887175 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8351A0A024R3B9 CRYAB-013 E9PJL7
E9PNH7 E9PR44 E9PRS4
E9PS12 P02511 V9HW27
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI3APPRIS candidate principal isoform (CCDS) [01-09-2014]
Glossary entry for APPRIS
APPRIS website
CRYAB-003ENST00000227251848175 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS8351A0A024R3B9 CRYAB-003 E9PJL7
E9PNH7 E9PR44 E9PRS4
E9PS12 P02511 V9HW27
-TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS CI3APPRIS candidate principal isoform (CCDS) [01-09-2014]
Glossary entry for APPRIS
APPRIS website
CRYAB-004ENST00000533971981155 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CRYAB-004 E9PRA8 E9PRS4
E9PS12
-TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CRYAB-005ENST00000527899965174 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CRYAB-005 E9PJL7 E9PNH7
E9PR44 E9PRS4 E9PS12
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

APPRIS CIAPPRIS candidate principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
CRYAB-008ENST00000525823915108 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A024R3B9 CRYAB-008 E9PNH7
-TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CRYAB-014ENST00000529647695130 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CRYAB-014 E9PJL7 E9PRS4
E9PS12
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CRYAB-007ENST0000052862862477 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CRYAB-007 E9PRS4 E9PS12
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CRYAB-011ENST00000533280545108 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A024R3B9 CRYAB-011 E9PNH7
-TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
CRYAB-010ENST00000526167517106 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CRYAB-010 E9PNH7 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CRYAB-006ENST0000053387947969 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CRYAB-006 E9PRS4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CRYAB-012ENST00000524660464106 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CRYAB-012 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

CRYAB-009ENST00000528961353108 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A0A024R3B9 CRYAB-009 E9PNH7
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 2 Coding exons: 2 Transcript length: 464 bps Translation length: 106 residues

Transcript Support Level

3

Ensembl version

ENST00000524660.1

Type

Putative protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays