Description

collagen, type I, alpha 1 [Source:HGNC Symbol;Acc:HGNC:2197]

Synonyms

OI4

Location
Gene

This transcript is a product of gene ENSG00000108821

This gene has 13 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
COL1A1-001ENST000002259646727 bp1464 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11561D3DTX7 P02452 Q6LAN8
Q9UMA6
NM_000088
NP_000079
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
COL1A1-013ENST00000507689549 bp154 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-I3L3H7 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
COL1A1-006ENST000004713441192 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
COL1A1-018ENST000005107101147 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
COL1A1-009ENST00000486572836 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
COL1A1-016ENST00000511732789 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
COL1A1-002ENST00000474644640 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
COL1A1-005ENST00000463440614 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
COL1A1-007ENST00000476387600 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
COL1A1-003ENST00000495677594 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
COL1A1-014ENST00000504289481 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
COL1A1-004ENST00000485870403 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
COL1A1-008ENST00000494334396 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 51 Coding exons: 51 Transcript length: 6,727 bps Translation length: 1,464 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS11561

Uniprot

This transcript corresponds to the following Uniprot identifiers: P02452

Ensembl version

ENST00000225964.6

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays