Description

collagen, type I, alpha 1 [Source:HGNC Symbol;Acc:2197]

Location
Gene

This transcript is a product of gene ENSG00000108821

This gene has 13 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
COL1A1-001ENST000002259646727ENSP000002259641464Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS11561YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
COL1A1-013ENST00000507689549ENSP00000460459154Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
COL1A1-006ENST000004713441192No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
COL1A1-018ENST000005107101147No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
COL1A1-009ENST00000486572836No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
COL1A1-016ENST00000511732789No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
COL1A1-002ENST00000474644640No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
COL1A1-005ENST00000463440614No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
COL1A1-007ENST00000476387600No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
COL1A1-003ENST00000495677594No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
COL1A1-014ENST00000504289481No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
COL1A1-004ENST00000485870403No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
COL1A1-008ENST00000494334396No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 51 Coding exons: 51 Transcript length: 6,727 bps Translation length: 1,464 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS11561

Ensembl version

ENST00000225964.5

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000309036 (version 2)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays