Description

paired-like homeodomain 3 [Source:HGNC Symbol;Acc:HGNC:9006]

Synonyms

ASMD

About this transcript

This transcript has 4 exons, is annotated with 11 domains and features, is associated with 40 variations and maps to 9 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
PITX3-001ENST000003700021391302aaENSP00000359019
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7532O75364 NM_005029
NP_005020
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
PITX3-201ENST000005398041187302aaENSP00000439383
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7532O75364 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Statistics

Exons: 4 Coding exons: 3 Transcript length: 1,391 bps Translation length: 302 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS7532

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75364

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000370002.6

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays