Description

paired-like homeodomain 3 [Source:HGNC Symbol;Acc:HGNC:9006]

Synonyms

ASMD

Gene

This transcript is a product of gene ENSG00000107859

This gene has 2 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
PITX3-001ENST000003700021391302 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7532O75364 NM_005029
NP_005020
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
PITX3-201ENST000005398041187302 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS7532O75364 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Statistics

Exons: 4 Coding exons: 3 Transcript length: 1,391 bps Translation length: 302 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS7532

Uniprot

This transcript corresponds to the following Uniprot identifiers: O75364

Transcript Support Level

1

Ensembl version

ENST00000370002.5

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays