Description

LIM homeobox 6 [Source:HGNC Symbol;Acc:21735]

Gene

This transcript is a product of gene ENSG00000106852

This gene has 12 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
LHX6-008ENST000005598953587ENSP00000475927176Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS59144YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
LHX6-001ENST000003943193466ENSP00000377854392Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS6838YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
LHX6-006ENST000003405873459ENSP00000340137377Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS6837YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
LHX6-002ENST000003737553384ENSP00000362860363Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS56583YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
LHX6-009ENST000005413972942ENSP00000441464366Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS56584YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
LHX6-003ENST000003737543280ENSP00000362859348Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
LHX6-005ENST00000464484967ENSP0000045281135Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
LHX6-004ENST00000482062918ENSP0000045379850Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
LHX6-011ENST00000560485736ENSP0000045360634Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
LHX6-010ENST00000559529550No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
LHX6-013ENST00000558672592No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
LHX6-012ENST00000560152582No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 9 Coding exons: 9 Transcript length: 3,459 bps Translation length: 377 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS6837

Ensembl version

ENST00000340587.3

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000316871 (version 1)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays