Description

POU class 6 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:21694]

Synonyms

RPF-1

Location
Gene

This transcript is a product of gene ENSG00000106536

This gene has 10 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
POU6F2-001ENST000005183185925 bp655 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS55103H0YL15 P78424 NM_001166018
NP_001159490
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
POU6F2-002ENST000004030582335 bp691 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS34620H0YL15 P78424 NM_007252
NP_009183
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
POU6F2-011ENST000005590012403 bp636 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YK27 H0YKR5 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
POU6F2-006ENST000005241471485 bp412 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YKR5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
POU6F2-007ENST000005201041290 bp403 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YL15 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
POU6F2-003ENST00000451021570 bp145 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JSC0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
POU6F2-005ENST000004164521028 bp142 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H7C2B2 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
POU6F2-010ENST000005173481578 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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POU6F2-009ENST00000426456532 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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POU6F2-004ENST00000464276530 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Statistics

Exons: 11 Coding exons: 10 Transcript length: 2,335 bps Translation length: 691 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS34620

Uniprot

This transcript corresponds to the following Uniprot identifiers: P78424

Ensembl version

ENST00000403058.2

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays