Description

even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]

Location
Gene

This transcript is a product of gene ENSG00000106038

This gene has 3 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
EVX1-001ENST000004969021703407 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5413P49640 NM_001989
NP_001980
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
EVX1-004ENST000005805351635106 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3QQJ1 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

EVX1-003ENST000002227611500201 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8W9J5 -TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Statistics

Exons: 3 Coding exons: 3 Transcript length: 1,703 bps Translation length: 407 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS5413

Uniprot

This transcript corresponds to the following Uniprot identifiers: P49640

Transcript Support Level

1

Ensembl version

ENST00000496902.5

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays