Human (GRCh38.p14)
Description

DNA ligase 1 [Source:HGNC Symbol;Acc:HGNC:6598]

Gene Synonyms

HLIG1, LIGI

Location
About this transcript

This transcript has 23 exons, is associated with 19141 variant alleles and maps to 682 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000263274.12LIG1-2013125919aaENSP00000263274.6
 
Protein coding
CCDS12711P18858-1 NM_000234.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000596549.6LIG1-2113180851aaENSP00000471861.2
 
Protein coding
CCDS74410F5GZ28 -GENCODE basicTSL:4
ENST00000699868.1LIG1-2233172919aaENSP00000514664.1
 
Protein coding
CCDS12711P18858-1 -GENCODE basicAPPRIS P4
ENST00000699875.1LIG1-2303126918aaENSP00000514671.1
 
Protein coding
A0A8V8TQQ7 -GENCODE basicAPPRIS ALT1
ENST00000699866.1LIG1-2213124918aaENSP00000514663.1
 
Protein coding
CCDS92658A0A8V8TQC4 -GENCODE basicAPPRIS ALT1
ENST00000699874.1LIG1-2293036889aaENSP00000514670.1
 
Protein coding
CCDS92657A0A8V8TPH8 -GENCODE basic
ENST00000427526.6LIG1-2023027888aaENSP00000442841.1
 
Protein coding
CCDS74409P18858-3 -GENCODE basicTSL:2
ENST00000699871.1LIG1-2263010886aaENSP00000514667.1
 
Protein coding
A0A8V8TNZ9 -GENCODE basic
ENST00000699877.1LIG1-2322922867aaENSP00000514672.1
 
Protein coding
A0A8V8TP03 -GENCODE basic
ENST00000699872.1LIG1-2274302135aaENSP00000514668.1
 
Nonsense mediated decay
A0A8V8TPA5 --
ENST00000699878.1LIG1-2334205544aaENSP00000514673.1
 
Nonsense mediated decay
A0A8V8TPB0 --
ENST00000594759.5LIG1-2064102800aaENSP00000471380.1
 
Nonsense mediated decay
M0R0Q7 -TSL:1
ENST00000699873.1LIG1-2284039771aaENSP00000514669.1
 
Nonsense mediated decay
A0A8V8TQC8 --
ENST00000601091.5LIG1-2193957801aaENSP00000471836.1
 
Nonsense mediated decay
P18858-2 -TSL:5
ENST00000596672.6LIG1-2123926256aaENSP00000472331.2
 
Nonsense mediated decay
M0R254 -TSL:3
ENST00000699870.1LIG1-2252914493aaENSP00000514666.1
 
Nonsense mediated decay
A0A8V8TQQ3 --
ENST00000699869.1LIG1-2242889498aaENSP00000514665.1
 
Nonsense mediated decay
A0A8V8TPH4 --
ENST00000542460.5LIG1-2031527415aaENSP00000445928.1
 
Nonsense mediated decay
B4E135 -TSL:2
ENST00000593425.5LIG1-204575No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000599165.5LIG1-216570No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000596104.5LIG1-208531No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000598938.1LIG1-215377No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000597901.2LIG1-2143591No protein-
 
Retained intron
--TSL:4
ENST00000699876.1LIG1-2313320No protein-
 
Retained intron
---
ENST00000699867.1LIG1-2222966No protein-
 
Retained intron
---
ENST00000594067.5LIG1-2052697No protein-
 
Retained intron
--TSL:2
ENST00000699879.1LIG1-2342667No protein-
 
Retained intron
---
ENST00000699881.1LIG1-2361672No protein-
 
Retained intron
---
ENST00000699880.1LIG1-2351659No protein-
 
Retained intron
---
ENST00000699865.1LIG1-220900No protein-
 
Retained intron
---
ENST00000596457.1LIG1-210792No protein-
 
Retained intron
--TSL:5
ENST00000599322.5LIG1-217620No protein-
 
Retained intron
--TSL:2
ENST00000595758.5LIG1-207606No protein-
 
Retained intron
--TSL:4
ENST00000600055.1LIG1-218602No protein-
 
Retained intron
--TSL:2
ENST00000597146.1LIG1-213589No protein-
 
Retained intron
--TSL:2
ENST00000596332.1LIG1-209584No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 23, Coding exons: 0, Transcript length: 2,697 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000594067.5

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.