Description

Mediterranean fever [Source:HGNC Symbol;Acc:HGNC:6998]

Synonyms

FMF, MEF, TRIM20

Location
Gene

This transcript is a product of gene ENSG00000103313

This gene has 15 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
MEFV-001ENST000002195963499 bp781 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS10498O15553 NM_000243
NP_000234
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MEFV-002ENST000005411591888 bp445 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS55981I4DSV7 O15553 NM_001198536
NP_001185465
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MEFV-010ENST000003398542959 bp601 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8W6Z2 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MEFV-201ENST000006216551883 bp411 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-I4DSV7 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MEFV-004ENST000005363791713 bp570 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-I4DSV7 O15553 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
MEFV-008ENST000005428983710 bp644 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F5H595 -
MEFV-006ENST000005376823617 bp613 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F5H2E5 -
MEFV-007ENST000005383263597 bp490 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F5H6N9 -
MEFV-009ENST000005369802984 bp402 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F5GZV9 I4DSV7 -
MEFV-015ENST000005705111751 bp306 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-I3L0S7 -
MEFV-003ENST000005391451267 bp95 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D2DTW1 -
MEFV-013ENST000005763151151 bp95 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D2DTW1 -
MEFV-014ENST000005745831118 bp95 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D2DTW1 -
MEFV-012ENST000005722441036 bp101 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-E3P8H6 -
MEFV-005ENST000005391541090 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 11 Coding exons: 6 Transcript length: 3,597 bps Translation length: 490 residues

Ensembl version

ENST00000538326.2

Type

Known nonsense mediated decay

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
Annotation Attributes

non-submitted evidence [Definitions]

Transcript-based displays