Human (GRCh38.p14)
Description

U6 snRNA biogenesis phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:25792]

Gene Synonyms

C16ORF57, FLJ13154, HVSL1, MPN1

Location
About this transcript

This transcript has 4 exons, is associated with 4446 variant alleles and maps to 226 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000219281.8USB1-2012248265aaENSP00000219281.3
 
Protein coding
CCDS10791Q9BQ65-1 NM_024598.4MANE SelectEnsembl CanonicalGENCODE basicTSL:1
ENST00000423271.8USB1-2023051186aaENSP00000409792.3
 
Protein coding
CCDS55997Q9BQ65-3 -GENCODE basicTSL:2
ENST00000698445.1USB1-2182489228aaENSP00000513727.1
 
Protein coding
A0A8V8TM89 -GENCODE basic
ENST00000563149.2USB1-2072254163aaENSP00000454692.1
 
Protein coding
CCDS81990H3BN52 -GENCODE basicTSL:2
ENST00000561568.6USB1-2042227252aaENSP00000457322.2
 
Protein coding
H3BTT8 -GENCODE basicTSL:4
ENST00000698444.1USB1-2172117214aaENSP00000513726.1
 
Protein coding
CCDS81991H3BNM8 -GENCODE basicAPPRIS P1
ENST00000698510.1USB1-2211402170aaENSP00000513760.1
 
Protein coding
A0A8V8TNL4 -GENCODE basic
ENST00000539737.6USB1-2031212247aaENSP00000446143.2
 
Protein coding
CCDS55998Q9BQ65-2 -GENCODE basicTSL:2
ENST00000561743.5USB1-2051135214aaENSP00000454928.1
 
Protein coding
CCDS81991H3BNM8 -GENCODE basicAPPRIS P1TSL:3
ENST00000698447.1USB1-2202224131aaENSP00000513732.1
 
Nonsense mediated decay
A0A8V8TM93 --
ENST00000698446.1USB1-219221690aaENSP00000513728.1
 
Nonsense mediated decay
A0A8V8TLS7 --
ENST00000565662.6USB1-2112168162aaENSP00000513729.1
 
Nonsense mediated decay
A0A8V8TLQ0 -TSL:4
ENST00000569252.5USB1-21557390aaENSP00000513730.1
 
Nonsense mediated decay
A0A8V8TLS7 -TSL:4
ENST00000562534.5USB1-20656250aaENSP00000513731.1
 
Nonsense mediated decay
A0A8V8TN78 -TSL:4
ENST00000564387.5USB1-20955895aaENSP00000457302.1
 
Nonsense mediated decay
H3BTS1 -TSL:4
ENST00000568848.5USB1-214548No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000563207.1USB1-208464No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000566082.1USB1-2123888No protein-
 
Retained intron
--TSL:2
ENST00000565151.1USB1-210886No protein-
 
Retained intron
--TSL:2
ENST00000566292.5USB1-213575No protein-
 
Retained intron
--TSL:2
ENST00000624720.1USB1-2162895No protein-
 
TEC
--TSL:NA
Statistics

Exons: 4, Coding exons: 0, Transcript length: 548 bps,

Transcript Support Level (TSL)

TSL:4

Version

ENST00000568848.5

Type

Protein coding CDS not defined

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.