Description

translin-associated factor X interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18586]

Synonyms

TXI1

Location
Gene

This transcript is a product of gene ENSG00000102904

This gene has 16 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
TSNAXIP1-001ENST000003888332429 bp658 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS10846J3QQL6 J3QSH8 Q2TAA8
NM_018430
NP_001275923
NP_060900
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TSNAXIP1-004ENST000004157662338 bp643 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E7ENJ7 J3QQL6 J3QSH8
NM_001288991
NM_001288992
NM_001288993
NP_001275920
NP_001275921
NP_001275922
NP_001275923
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TSNAXIP1-006ENST000005616392258 bp712 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B4DXD0 J3QQL6 J3QSH8
NM_001288990
NP_001275919
NP_001275923
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TSNAXIP1-008ENST000004319341284 bp428 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3KQF4 -CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
TSNAXIP1-014ENST00000567852834 bp80 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3QQL6 J3QSH8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
TSNAXIP1-011ENST00000565148555 bp171 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BNS9 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
TSNAXIP1-013ENST00000561654547 bp33 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3QSH8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
TSNAXIP1-009ENST000005689902517 bp141 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BQ72 -
TSNAXIP1-003ENST000004661642228 bp61 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-I3L1M2 -
TSNAXIP1-015ENST00000565558816 bp123 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
TSNAXIP1-012ENST00000563363619 bp97 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BNU6 -
TSNAXIP1-016ENST00000562321475 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
TSNAXIP1-002ENST000004871202159 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
TSNAXIP1-007ENST000005695042009 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
TSNAXIP1-005ENST000005653391818 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
TSNAXIP1-010ENST00000562633474 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 16 Coding exons: 16 Transcript length: 2,258 bps Translation length: 712 residues

Ensembl version

ENST00000561639.2

Type

Novel protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays