Description

translin-associated factor X interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18586]

Synonyms

TXI1

Location
About this transcript

This transcript has 5 exons, is associated with 23 variations and maps to 6 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
TSNAXIP1-001ENST000003888332429658aaENSP00000373485
 
Protein coding
CCDS10846Q2TAA8 NM_018430
NP_060900
TSL:1GENCODE basicAPPRIS P3
TSNAXIP1-004ENST000004157662338643aaENSP00000411472
 
Protein coding
CCDS73904E7ENJ7 NM_001288991
NM_001288992
NM_001288993
NP_001275920
NP_001275921
NP_001275922
TSL:2GENCODE basicAPPRIS ALT2
TSNAXIP1-006ENST000005616392258712aaENSP00000457241
 
Protein coding
CCDS73903B4DXD0 NM_001288990
NP_001275919
TSL:2GENCODE basicAPPRIS ALT2
TSNAXIP1-008ENST000004319341284428aaENSP00000397147
 
Protein coding
-J3KQF4 -CDS 5' and 3' incompleteTSL:2APPRIS ALT2
TSNAXIP1-014ENST0000056785283480aaENSP00000463792
 
Protein coding
-J3QQL6 -CDS 3' incompleteTSL:3APPRIS ALT2
TSNAXIP1-011ENST00000565148555171aaENSP00000454989
 
Protein coding
-H3BNS9 -CDS 3' incompleteTSL:4APPRIS ALT2
TSNAXIP1-013ENST0000056165454733aaENSP00000464694
 
Protein coding
-J3QSH8 -CDS 3' incompleteTSL:4APPRIS ALT2
TSNAXIP1-009ENST000005689902517141aaENSP00000455640
 
Nonsense mediated decay
-H3BQ72 -TSL:5APPRIS ALT2
TSNAXIP1-003ENST00000466164222861aaENSP00000458938
 
Nonsense mediated decay
-I3L1M2 -TSL:1APPRIS ALT2
TSNAXIP1-015ENST00000565558816123aaENSP00000464527
 
Nonsense mediated decay
-J3QS50 -CDS 5' incompleteTSL:3APPRIS ALT2
TSNAXIP1-012ENST0000056336361997aaENSP00000455011
 
Nonsense mediated decay
-H3BNU6 -TSL:5APPRIS ALT2
TSNAXIP1-016ENST00000562321475No protein-
 
Processed transcript
---TSL:2
TSNAXIP1-002ENST000004871202159No protein-
 
Retained intron
---TSL:1
TSNAXIP1-007ENST000005695042009No protein-
 
Retained intron
---TSL:2
TSNAXIP1-005ENST000005653391818No protein-
 
Retained intron
---TSL:1
TSNAXIP1-010ENST00000562633474No protein-
 
Retained intron
---TSL:5
Statistics

Exons: 5 Coding exons: 4 Transcript length: 619 bps Translation length: 97 residues

Transcript Support Level (TSL)

TSL:5

Ensembl version

ENST00000563363.5

Type

Known nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays