Human (GRCh38.p14)
Description

synaptophysin [Source:HGNC Symbol;Acc:HGNC:11506]

Gene Synonyms

MRX96

Location
About this transcript

This transcript has 7 exons, is annotated with 16 domains and features, is associated with 4002 variant alleles and maps to 359 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000263233.9SYP-2012421313aaENSP00000263233.4
 
Protein coding
CCDS14321P08247-1 NM_003179.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000479808.5SYP-2071850313aaENSP00000418169.1
 
Protein coding
CCDS14321P08247-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000472598.5SYP-205761203aaENSP00000418387.1
 
Protein coding
H7C4W3 -TSL:3CDS 5' incomplete
ENST00000376303.6SYP-20285840aaENSP00000365480.2
 
Nonsense mediated decay
G5E9A2 -TSL:2
ENST00000466635.1SYP-203513118aaENSP00000420774.1
 
Nonsense mediated decay
F2Z3E1 -TSL:4
ENST00000469389.5SYP-204581No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000689634.1SYP-2093418No protein-
 
Retained intron
---
ENST00000692723.1SYP-2112092No protein-
 
Retained intron
---
ENST00000494396.5SYP-2082062No protein-
 
Retained intron
--TSL:2
ENST00000691258.1SYP-2101926No protein-
 
Retained intron
---
ENST00000472737.1SYP-206574No protein-
 
Retained intron
--TSL:4
Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,421 bps, Translation length: 313 residues

MANE

This MANE Select transcript contains ENSP00000263233 and matches to NM_003179.3 and NP_003170.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: P08247

CCDS

This transcript is a member of the Human CCDS set: CCDS14321

Transcript Support Level (TSL)

TSL:1

Version

ENST00000263233.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.