Description

cystatin C [Source:HGNC Symbol;Acc:HGNC:2475]

Location
Gene

This transcript is a product of gene ENSG00000101439

This gene has 3 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
CST3-002ENST000003984113286146 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13158E9RH26 P01034 NM_001288614
NP_001275543
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
CST3-001ENST00000376925873146 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13158E9RH26 P01034 NM_000099
NP_000090
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
CST3-003ENST00000398409832146 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13158E9RH26 P01034 -TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
Statistics

Exons: 4 Coding exons: 3 Transcript length: 3,286 bps Translation length: 146 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS13158

Uniprot

This transcript corresponds to the following Uniprot identifiers: P01034

Transcript Support Level

1

Ensembl version

ENST00000398411.3

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays