Description

R-spondin 4 [Source:HGNC Symbol;Acc:HGNC:16175]

Synonyms

C20orf182, dJ824F16.3

Location
About this transcript

This transcript has 5 exons, is annotated with 9 domains and features, is associated with 103 variations and maps to 11 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
RSPO4-001ENST000002172602707234aaENSP00000217260
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS42846Q2I0M5 NM_001029871
NP_001025042
TSL:2

TSL2: The best supporting mRNA is flagged as suspect or the support is from multiple ESTs.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
RSPO4-002ENST00000400634722172aaENSP00000383475
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS42845Q2I0M5 NM_001040007
NP_001035096
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Statistics

Exons: 5 Coding exons: 5 Transcript length: 2,707 bps Translation length: 234 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS42846

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q2I0M5

Transcript Support Level (TSL)

TSL:2

Ensembl version

ENST00000217260.7

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays