Description

cochlin [Source:HGNC Symbol;Acc:HGNC:2180]

Synonyms

COCH-5B2, DFNA31, DFNA9

Location
About this transcript

This transcript has 11 exons, is annotated with 22 domains and features, is associated with 217 variations and maps to 35 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
COCH-005ENST000003966182536550aaENSP00000379862
 
Protein coding
CCDS9640O43405 NM_004086
NP_004077
TSL:1GENCODE basicAPPRIS P1
COCH-006ENST000002163612397550aaENSP00000216361
 
Protein coding
CCDS9640O43405 NM_001135058
NP_001128530
TSL:1GENCODE basicAPPRIS P1
COCH-007ENST000004605812688438aaENSP00000451713
 
Protein coding
-G3V4C4 -TSL:2GENCODE basic
COCH-008ENST000004688262129434aaENSP00000452284
 
Protein coding
-H0YJW4 -CDS 5' incompleteTSL:2
COCH-003ENST000004750871997494aaENSP00000451528
 
Protein coding
-O43405 -TSL:1GENCODE basic
COCH-011ENST00000555881782202aaENSP00000452569
 
Protein coding
-G3V5X3 -CDS 3' incompleteTSL:2
COCH-012ENST00000556908775193aaENSP00000452541
 
Protein coding
-G3V5V4 -CDS 3' incompleteTSL:3
COCH-014ENST0000055706565455aaENSP00000451629
 
Nonsense mediated decay
-H0YJJ0 -CDS 5' incompleteTSL:5
COCH-010ENST0000055377255480aaENSP00000452343
 
Nonsense mediated decay
-G3V5G6 -TSL:4
COCH-013ENST00000553833635No protein-
 
Retained intron
---TSL:5
COCH-009ENST00000555117619No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 11 Coding exons: 11 Transcript length: 2,397 bps Translation length: 550 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS9640

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43405

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000216361.8

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays