Description

ABL proto-oncogene 1, non-receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:76]

Synonyms

ABL, c-ABL, JTK7, p150

About this transcript

This transcript has 11 exons, is annotated with 34 domains and features, is associated with 670 variations and maps to 45 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
ABL1-001ENST0000031856057661130aaENSP00000323315
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS35166A0A024R8E2 P00519 NM_005157
NP_005148
TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ABL1-002ENST0000037234838241149aaENSP00000361423
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS35165P00519 NM_007313
NP_009297
CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:1

Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

ABL1-003ENST0000039329353264aaENSP00000376971
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-R4GRW0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 11 Coding exons: 11 Transcript length: 5,766 bps Translation length: 1,130 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS35166

Uniprot

This transcript corresponds to the following Uniprot identifiers: P00519

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000318560.5

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays