Description

deleted in azoospermia-like [Source:HGNC Symbol;Acc:HGNC:2685]

Synonyms

DAZH, DAZL1, DAZLA, MGC26406, SPGYLA

Location
About this transcript

This transcript has 11 exons, is annotated with 5 domains and features, is associated with 74 variations and maps to 13 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
DAZL-002ENST000002508633104315aaENSP00000250863
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS54556Q92904 NM_001190811
NP_001177740
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
DAZL-001ENST000003994443050295aaENSP00000382373
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS43059Q92904 NM_001351
NP_001342
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PI1APPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
DAZL-004ENST00000454457725204aaENSP00000398109
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E7EV40 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 11 Coding exons: 11 Transcript length: 3,104 bps Translation length: 315 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS54556

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92904

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000250863.11

Type

Novel protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays