Human (GRCh38.p14)
Description

RPGR interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:13436]

Gene Synonyms

CORD13, LCA6, RGI1, RPGRIP

Location
About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 1823 variant alleles and maps to 150 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000400017.7RPGRIP1-20240611286aaENSP00000382895.2
 
Protein coding
CCDS45080Q96KN7-1 NM_020366.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000557771.5RPGRIP1-21338701248aaENSP00000451219.1
 
Protein coding
G3V3F7 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000556336.5RPGRIP1-2102955943aaENSP00000450445.1
 
Protein coding
G3V236 -GENCODE basicTSL:5
ENST00000555587.5RPGRIP1-2092371761aaENSP00000451262.1
 
Protein coding
G3V3I7 -TSL:1CDS 5' incomplete
ENST00000382933.8RPGRIP1-2012004612aaENSP00000372391.4
 
Protein coding
CCDS91848Q96KN7-4 -GENCODE basicTSL:1
ENST00000557351.1RPGRIP1-211566166aaENSP00000452215.1
 
Protein coding
G3V577 -TSL:4CDS 3' incomplete
ENST00000554303.1RPGRIP1-205429143aaENSP00000450426.1
 
Protein coding
H0YIY1 -TSL:1CDS 5' and 3' incomplete
ENST00000557606.1RPGRIP1-212402134aaENSP00000451719.1
 
Protein coding
H0YJK6 -TSL:5CDS 5' and 3' incomplete
ENST00000555322.5RPGRIP1-207237326aaENSP00000450662.1
 
Nonsense mediated decay
H0YJ18 -TSL:1CDS 5' incomplete
ENST00000555489.5RPGRIP1-208213959aaENSP00000451044.1
 
Nonsense mediated decay
H0YJ99 -TSL:1CDS 5' incomplete
ENST00000553500.5RPGRIP1-203585No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000553927.1RPGRIP1-2042875No protein-
 
Retained intron
--TSL:2
ENST00000554750.1RPGRIP1-206571No protein-
 
Retained intron
--TSL:5
Statistics

Exons: 4, Coding exons: 4, Transcript length: 566 bps, Translation length: 166 residues

Transcript Support Level (TSL)

TSL:4

Incomplete CDS

CDS 3' incomplete

Version

ENST00000557351.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.