Human (GRCh38.p14)
Description

integrin subunit alpha 6 [Source:HGNC Symbol;Acc:HGNC:6142]

Gene Synonyms

CD49F, ITGA6A, ITGA6B, VLA-6

About this transcript

This transcript has 25 exons, is annotated with 38 domains and features, is associated with 33139 variant alleles and maps to 907 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000684293.1ITGA6-21258161073aaENSP00000508249.1
 
Protein coding
CCDS2249P23229-2 NM_000210.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3
ENST00000442250.6ITGA6-20658031130aaENSP00000406694.1
 
Protein coding
CCDS92897P23229-1 NM_001394928.1MANE Plus ClinicalGENCODE basicTSL:5
ENST00000409080.6ITGA6-20256861091aaENSP00000386896.1
 
Protein coding
CCDS46451P23229-3 -GENCODE basicAPPRIS ALT1TSL:2
ENST00000264107.12ITGA6-20154881058aaENSP00000264107.8
 
Protein coding
CCDS92898A0A8C8KBL6 -GENCODE basicTSL:1
ENST00000409532.5ITGA6-2033544954aaENSP00000386614.1
 
Protein coding
CCDS82534P23229-7 -GENCODE basicTSL:2
ENST00000458358.5ITGA6-20732611086aaENSP00000394169.1
 
Protein coding
P23229-5 -GENCODE basicTSL:5
ENST00000412899.5ITGA6-204970231aaENSP00000413470.1
 
Protein coding
C9JXX7 -TSL:1CDS 3' incomplete
ENST00000416789.1ITGA6-205853258aaENSP00000388435.1
 
Protein coding
H7BZ97 -TSL:3CDS 5' incomplete
ENST00000469534.1ITGA6-208581No protein-
 
Retained intron
--TSL:2
ENST00000475302.1ITGA6-210577No protein-
 
Retained intron
--TSL:3
ENST00000497107.1ITGA6-211573No protein-
 
Retained intron
--TSL:2
ENST00000470259.1ITGA6-209365No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 25, Coding exons: 25, Transcript length: 5,686 bps, Translation length: 1,091 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P23229

CCDS

This transcript is a member of the Human CCDS set: CCDS46451

Transcript Support Level (TSL)

TSL:2

Version

ENST00000409080.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.