Description

glycoprotein VI (platelet) [Source:HGNC Symbol;Acc:HGNC:14388]

Synonyms

GPVI

Location
Gene

This transcript is a product of gene ENSG00000088053
View alternative alleles of this gene

This gene has 5 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
GP6-002ENST000003103732268620 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS42626GP6-002 K7EIW7 Q9HCN6
NM_001083899
NP_001077368
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
GP6-001ENST000004174542264339 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS46184GP6-001 K7EIW7 Q9HCN6
NM_016363
NP_057447
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform [01-09-2014]
Glossary entry for APPRIS
APPRIS website
GP6-003ENST000003338842210321 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS58678GP6-003 K7EIW7 Q9HCN6
NM_001256017
NP_001242946
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
GP6-005ENST00000468239876117 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-GP6-005 K7EIW7 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GP6-004ENST00000465648859No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
-GP6-004 -TSL:3

TSL3:The only support for this transcript is from a single EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

Statistics

Exons: 7 Coding exons: 7 Transcript length: 2,210 bps Translation length: 321 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS58678

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9HCN6

Transcript Support Level

1

Ensembl version

ENST00000333884.2

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays