Description

alpha thalassemia/mental retardation syndrome X-linked [Source:HGNC Symbol;Acc:HGNC:886]

Synonyms

JMS, RAD54, XH2, XNP

Location
About this transcript

This transcript has 3 exons and maps to 14 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
ATRX-001ENST00000373344112202492aaENSP00000362441
 
Protein coding
CCDS14434A4LAA3 P46100 NM_000489
NP_000480
TSL:1GENCODE basicAPPRIS P4
ATRX-002ENST00000395603102182454aaENSP00000378967
 
Protein coding
CCDS14435P46100 NM_138270
NP_612114
TSL:1GENCODE basicAPPRIS ALT2
ATRX-010ENST0000062416642721351aaENSP00000485103
 
Protein coding
-A0A096LNL9 -CDS 3' incompleteTSL:1
ATRX-004ENST000006240323071954aaENSP00000485253
 
Protein coding
-A0A096LNW1 -CDS 3' incompleteTSL:1
ATRX-005ENST000004934702967293aaENSP00000485408
 
Protein coding
-A0A096LP59 -CDS 5' incompleteTSL:1
ATRX-009ENST000006233211860528aaENSP00000485127
 
Protein coding
-A0A096LNN3 -CDS 3' incompleteTSL:1
ATRX-007ENST00000400866814198aaENSP00000383663
 
Protein coding
-H0Y3T0 -CDS 5' incompleteTSL:5
ATRX-012ENST0000062296062847aaENSP00000485587
 
Protein coding
-A0A096LPG6 -CDS 3' incompleteTSL:5
ATRX-015ENST00000625063593198aaENSP00000485099
 
Protein coding
-A0A096LNL6 -CDS 5' and 3' incompleteTSL:5
ATRX-013ENST00000624668583108aaENSP00000485100
 
Protein coding
-A0A096LNL7 -CDS 3' incompleteTSL:5
ATRX-003ENST0000048028310455164aaENSP00000480196
 
Nonsense mediated decay
-A0A087WWG0 -TSL:1
ATRX-018ENST00000623316803175aaENSP00000485274
 
Nonsense mediated decay
-A0A096LNX6 -CDS 5' incompleteTSL:5
ATRX-016ENST0000062324272566aaENSP00000485183
 
Nonsense mediated decay
-A0A096LNR8 -CDS 5' incompleteTSL:3
ATRX-014ENST00000624193463No protein-
 
Processed transcript
---TSL:4
ATRX-011ENST000006237067245No protein-
 
Retained intron
---TSL:2
ATRX-017ENST00000624403583No protein-
 
Retained intron
---TSL:3
ATRX-019ENST00000624766580No protein-
 
Retained intron
---TSL:2
ATRX-006ENST00000460639461No protein-
 
Retained intron
---TSL:3
ATRX-008ENST00000479487408No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 3 Coding exons: 0 Transcript length: 461 bps

Transcript Support Level (TSL)

TSL:3

Ensembl version

ENST00000460639.2

Type

Known retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays