Human (GRCh38.p14)
Description

FAT atypical cadherin 1 [Source:HGNC Symbol;Acc:HGNC:3595]

Gene Synonyms

CDHF7, CDHR8, FAT

About this transcript

This transcript has 27 exons, is annotated with 275 domains and features, is associated with 90418 variant alleles and maps to 908 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000441802.7FAT1-201147764588aaENSP00000406229.2
 
Protein coding
CCDS47177Q14517 NM_005245.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:5
ENST00000509647.1FAT1-2081852488aaENSP00000423736.1
 
Protein coding
D6RCE4 -TSL:1CDS 3' incomplete
ENST00000512772.5FAT1-2111305368aaENSP00000424157.1
 
Protein coding
H0Y9H4 -TSL:2CDS 5' incomplete
ENST00000507105.1FAT1-204854285aaENSP00000423801.1
 
Protein coding
H0Y9C8 -TSL:3CDS 5' and 3' incomplete
ENST00000509537.1FAT1-20747952aaENSP00000421003.1
 
Protein coding
D6RHE6 -GENCODE basicTSL:3
ENST00000509927.1FAT1-209357119aaENSP00000420869.1
 
Protein coding
H0Y8F5 -TSL:1CDS 5' and 3' incomplete
ENST00000512347.1FAT1-210512No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000507662.1FAT1-205428No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000500085.2FAT1-2022224No protein-
 
Retained intron
--TSL:2
ENST00000503253.1FAT1-203462No protein-
 
Retained intron
--TSL:2
ENST00000508035.1FAT1-206341No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 27, Coding exons: 26, Transcript length: 14,776 bps, Translation length: 4,588 residues

MANE

This MANE Select transcript contains ENSP00000406229 and matches to NM_005245.4 and NP_005236.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14517

CCDS

This transcript is a member of the Human CCDS set: CCDS47177

Transcript Support Level (TSL)

TSL:5

Version

ENST00000441802.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.