Description

partner and localizer of BRCA2 [Source:HGNC Symbol;Acc:HGNC:26144]

Synonyms

FANCN, FLJ21816

Location
About this transcript

This transcript has 13 exons, is annotated with 11 domains and features, is associated with 715 variations and maps to 33 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
PALB2-001ENST0000026158440031186aaENSP00000261584
 
Protein coding
CCDS32406Q86YC2 NM_024675
NP_078951
TSL:1GENCODE basicAPPRIS P1
PALB2-006ENST0000056151481590aaENSP00000460666
 
Protein coding
-I3L3R6 -CDS 3' incompleteTSL:5
PALB2-005ENST0000056606962643aaENSP00000459237
 
Protein coding
-I3L1Z5 -CDS 5' incompleteTSL:5
PALB2-002ENST00000568219396335aaENSP00000454703
 
Nonsense mediated decay
-H3BN63 -TSL:1
PALB2-004ENST0000056503834430aaENSP00000459882
 
Nonsense mediated decay
-I3L2S5 -CDS 5' incompleteTSL:3
PALB2-003ENST00000567003789No protein-
 
Processed transcript
---TSL:3
Statistics

Exons: 13 Coding exons: 13 Transcript length: 4,003 bps Translation length: 1,186 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS32406

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86YC2

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000261584.8

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays