Description

partner and localizer of BRCA2 [Source:HGNC Symbol;Acc:HGNC:26144]

Synonyms

FANCN, FLJ21816

Location
Gene

This transcript is a product of gene ENSG00000083093

This gene has 6 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
PALB2-001ENST000002615844003 bp1186 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS32406Q86YC2 NM_024675
NP_078951
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PALB2-006ENST00000561514815 bp90 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-I3L3R6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PALB2-005ENST00000566069626 bp43 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
PALB2-002ENST000005682193963 bp35 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BN63 -
PALB2-004ENST00000565038344 bp30 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
PALB2-003ENST00000567003789 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
Statistics

Exons: 13 Coding exons: 13 Transcript length: 4,003 bps Translation length: 1,186 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS32406

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86YC2

Ensembl version

ENST00000261584.5

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays