Description

partner and localizer of BRCA2 [Source:HGNC Symbol;Acc:HGNC:26144]

Synonyms

FANCN, FLJ21816

Location
Gene

This transcript is a product of gene ENSG00000083093

This gene has 6 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
PALB2-001ENST000002615844003 bp1186 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS32406Q86YC2 NM_024675
NP_078951
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PALB2-006ENST00000561514815 bp90 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-I3L3R6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PALB2-005ENST00000566069626 bp43 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
PALB2-002ENST000005682193963 bp35 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BN63 -
PALB2-004ENST00000565038344 bp30 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
PALB2-003ENST00000567003789 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
Statistics

Exons: 13 Coding exons: 3 Transcript length: 3,963 bps Translation length: 35 residues

Ensembl version

ENST00000568219.2

Type

Known nonsense mediated decay

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays