Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [Source:HGNC Symbol;Acc:HGNC:11108]

Synonyms

BAF60C, CRACD3, Rsc6p

Gene

This transcript is a product of gene ENSG00000082014

This gene has 15 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
SMARCD3-001ENST000003928112018 bp470 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5924C9JYI7 Q6STE5 NM_003078
NP_003069
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SMARCD3-002ENST000002621881993 bp483 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS34780Q6STE5 NM_001003801
NP_001003801
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SMARCD3-201ENST000003568001669 bp470 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS5924C9JYI7 Q6STE5 NM_001003802
NP_001003802
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SMARCD3-008ENST00000491651613 bp139 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C9JYI7 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SMARCD3-004ENST000004691542415 bp73 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F8WBJ3 -
SMARCD3-011ENST00000485592820 bp68 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
SMARCD3-009ENST00000477169802 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
SMARCD3-010ENST00000460431673 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
SMARCD3-015ENST00000496530468 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
SMARCD3-013ENST00000489503378 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
SMARCD3-007ENST000004705881755 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
SMARCD3-005ENST000004729881654 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
SMARCD3-006ENST000004856101480 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
SMARCD3-014ENST00000472789863 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
SMARCD3-012ENST00000472103798 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 7 Coding exons: 0 Transcript length: 1,480 bps

Ensembl version

ENST00000485610.2

Type

Known retained intron

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays