Description

presenilin 1 [Source:HGNC Symbol;Acc:9508]

Location
Gene

This transcript is a product of gene ENSG00000080815

This gene has 27 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDSGENCODE basic
PSEN1-001ENST000003245016078ENSP00000326366467Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS9812YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PSEN1-003ENST000003941643046ENSP00000377719463Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS9813YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PSEN1-002ENST000003577102776ENSP00000350342463Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS9813YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PSEN1-005ENST000004067684062ENSP00000385948375Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PSEN1-202ENST000003440942856ENSP00000339523378Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PSEN1-201ENST000002619702590ENSP00000261970409Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PSEN1-004ENST000003941571249ENSP00000377712184Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PSEN1-027ENST000005575111230ENSP00000451429409Protein codingGenes and/or transcript that contains an open reading frame (ORF).--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PSEN1-021ENST00000555254754ENSP00000450652155Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
PSEN1-016ENST00000553719712ENSP00000451674147Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
PSEN1-028ENST00000560005699ENSP00000453466109Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
PSEN1-011ENST00000556066612ENSP0000045226758Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
PSEN1-012ENST00000553599591ENSP0000045247792Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
PSEN1-020ENST00000554131591ENSP00000451915109Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
PSEN1-015ENST00000557293576ENSP0000045188099Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
PSEN1-007ENST00000556864574ENSP0000045158863Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
PSEN1-013ENST00000557356571ENSP00000451498135Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
PSEN1-008ENST00000557037555ENSP0000045134762Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
PSEN1-014ENST00000556951552ENSP0000045055191Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
PSEN1-009ENST00000556533550ENSP0000045212892Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
PSEN1-026ENST00000556011442ENSP0000045166243Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'--
PSEN1-006ENST000005553861484ENSP00000450845374Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
PSEN1-024ENST000005538551254ENSP00000452242378Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
PSEN1-029ENST00000559361795ENSP0000045415657Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. ---
PSEN1-019ENST00000553447572No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
PSEN1-022ENST00000555867876No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
PSEN1-023ENST00000554995592No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.---
Statistics

Exons: 12 Coding exons: 10 Transcript length: 6,078 bps Translation length: 467 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS9812

Ensembl version

ENST00000324501.5

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000280500 (version 2)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays