Description

presenilin 1 [Source:HGNC Symbol;Acc:HGNC:9508]

Synonyms

AD3, FAD, PS1, S182

Location
Gene

This transcript is a product of gene ENSG00000080815

This gene has 25 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
PSEN1-001ENST000003245016078 bp467 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9812E7ES96 G3V2G7 G3V4M0
G3V4P4 P49768
NM_000021
NP_000012
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PSEN1-003ENST000003941643046 bp463 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9813E7ES96 G3V2B1 G3V3P0
G3V3Z0 G3V449 G3V499
G3V519 G3V5B1 H0YM52
P49768
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PSEN1-002ENST000003577102776 bp463 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9813E7ES96 G3V2B1 G3V3P0
G3V3Z0 G3V449 G3V499
G3V519 G3V5B1 H0YM52
P49768
NM_007318
NP_015557
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PSEN1-005ENST000004067684062 bp375 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E7ES96 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PSEN1-004ENST000003941571249 bp184 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V2G7 G3V4M0 G3V4P4
P49768
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PSEN1-027ENST000005575111230 bp409 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V2G7 G3V4M0 G3V4P4
P49768
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PSEN1-021ENST00000555254754 bp155 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V2G7 G3V4M0 G3V4P4
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PSEN1-016ENST00000553719712 bp147 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V2B1 G3V3P0 G3V3Z0
G3V449 G3V499 G3V519
G3V5B1 H0YM52
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PSEN1-028ENST00000560005699 bp109 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V2B1 G3V3P0 G3V449
G3V519 G3V5B1 H0YM52
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PSEN1-011ENST00000556066612 bp58 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V5B1 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PSEN1-012ENST00000553599591 bp92 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V2B1 G3V3P0 G3V449
G3V519 G3V5B1
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PSEN1-020ENST00000554131591 bp109 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V4M0 G3V4P4 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PSEN1-015ENST00000557293576 bp99 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V4M0 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PSEN1-007ENST00000556864574 bp63 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V3P0 G3V449 G3V5B1
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PSEN1-013ENST00000557356571 bp135 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V2B1 G3V3P0 G3V3Z0
G3V449 G3V519 G3V5B1
H0YM52
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PSEN1-008ENST00000557037555 bp62 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V3P0 G3V5B1 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PSEN1-014ENST00000556951552 bp91 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V2B1 G3V3P0 G3V449
G3V5B1
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PSEN1-009ENST00000556533550 bp92 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V2B1 G3V3P0 G3V449
G3V519 G3V5B1
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PSEN1-026ENST00000556011442 bp43 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V490 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PSEN1-006ENST000005553861484 bp374 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-G3V2B1 G3V3P0 G3V3Z0
G3V449 G3V499 G3V519
G3V5B1 H0YM52 P49768
-
PSEN1-024ENST000005538551254 bp378 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-G3V2G7 G3V4M0 G3V4P4
P49768
-
PSEN1-029ENST00000559361795 bp57 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H0YNU4 -
PSEN1-019ENST00000553447572 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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PSEN1-022ENST00000555867876 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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PSEN1-023ENST00000554995592 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 6 Coding exons: 0 Transcript length: 572 bps

Ensembl version

ENST00000553447.3

Type

Known processed transcript

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays