Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:HGNC Symbol;Acc:HGNC:11109]

Synonyms

BAF57

Location
Gene

This transcript is a product of gene ENSG00000073584

This gene has 19 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
SMARCE1-001ENST000003485135840 bp411 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS11370B4DGM3 C0IMW8 J3KT85
J3QKX6 J3QR61 Q969G3
NM_003079
NP_003070
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SMARCE1-006ENST000004742462124 bp77 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3QL66 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SMARCE1-012ENST000004318891569 bp393 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B4DGM3 C0IMW8 J3KT85
J3QR61
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SMARCE1-008ENST000003778081307 bp328 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H7C048 J3KT85 Q969G3
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SMARCE1-015ENST000004001221263 bp293 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H7C048 J3KT85 Q969G3
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SMARCE1-013ENST000005804191228 bp376 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3KT85 Q969G3 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SMARCE1-014ENST000005780441184 bp341 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3KT85 Q969G3 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
SMARCE1-018ENST000004783491090 bp288 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C0IMW8 J3KT85 J3QKS7
J3QR61
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SMARCE1-009ENST00000264640631 bp177 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H7C048 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
SMARCE1-019ENST00000582955621 bp129 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3QKX6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SMARCE1-016ENST00000580654554 bp153 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-C0IMW8 J3KT85 J3QR61
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SMARCE1-010ENST00000447024536 bp157 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H7C048 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
SMARCE1-017ENST00000577721449 bp101 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3KT85 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
SMARCE1-011ENST000005781122384 bp52 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-J3QS32 -
SMARCE1-007ENST00000481231695 bp55 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-J3KS99 -
SMARCE1-004ENST000004936602284 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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SMARCE1-003ENST000004693342128 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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SMARCE1-020ENST00000578995534 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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SMARCE1-021ENST00000583294476 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 10 Coding exons: 9 Transcript length: 1,228 bps Translation length: 376 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q969G3

Ensembl version

ENST00000580419.2

Type

Novel protein coding

Prediction Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays