Description

LIM and cysteine rich domains 1 [Source:HGNC Symbol;Acc:HGNC:6633]

Location
About this transcript

This transcript has 6 exons, is annotated with 19 domains and features, is associated with 340 variations and maps to 699 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
LMCD1-201ENST00000157600.78405365aaENSP00000157600
 
Protein coding
CCDS33688Q9NZU5 -TSL:1GENCODE basicAPPRIS P1
LMCD1-202ENST00000397386.71501253aaENSP00000380542
 
Protein coding
CCDS63533B4DEY6 NM_001278234
NM_014583
NP_001265163
NP_055398
TSL:2GENCODE basic
LMCD1-204ENST00000426878.21431247aaENSP00000411222
 
Protein coding
CCDS63532H7C3D2 NM_001278235
NP_001265164
TSL:2GENCODE basic
LMCD1-205ENST00000454244.41113292aaENSP00000396515
 
Protein coding
CCDS63534Q9NZU5 NM_001278233
NP_001265162
TSL:2GENCODE basic
LMCD1-203ENST00000415597.5870233aaENSP00000400555
 
Protein coding
-C9IYS1 -CDS 3' incompleteTSL:5
LMCD1-206ENST00000456506.2105958aaENSP00000405049
 
Nonsense mediated decay
-F8WB09 -TSL:2
LMCD1-207ENST00000470776.1579No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 6, Coding exons: 6, Transcript length: 8,405 bps, Translation length: 365 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS33688

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NZU5

Transcript Support Level (TSL)

TSL:1

Version

ENST00000157600.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

3' standard supported extension [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays