Description

RAR-related orphan receptor A [Source:HGNC Symbol;Acc:HGNC:10258]

Synonyms

NR1F1, ROR1, ROR2, ROR3, RZRA

Location
Gene

This transcript is a product of gene ENSG00000069667

This gene has 14 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
RORA-001ENST0000033567010844 bp523 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS10177P35398 NM_134261
NP_599023
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
RORA-003ENST000002615231951 bp556 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS10179P35398 NM_134260
NP_599022
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
RORA-002ENST000003091571908 bp548 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS10178P35398 NM_002943
NP_002934
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
RORA-005ENST000004493371701 bp468 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS45271F1DAL0 P35398 NM_134262
NP_599024
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
RORA-009ENST00000559343577 bp153 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YLS5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
RORA-014ENST00000558904492 bp38 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
RORA-004ENST00000551975749 bp62 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
RORA-012ENST00000560004544 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
RORA-013ENST00000560300514 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
RORA-007ENST00000559587485 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
RORA-010ENST00000559145373 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
RORA-006ENST000005582343910 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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RORA-011ENST00000561093642 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
RORA-008ENST00000557822545 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 12 Coding exons: 12 Transcript length: 1,951 bps Translation length: 556 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS10179

Uniprot

This transcript corresponds to the following Uniprot identifiers: P35398

Ensembl version

ENST00000261523.6

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays