Description

vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:13487]

Location
Gene

This transcript is a product of gene ENSG00000069329

This gene has 11 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCCDSGENCODE basic
VPS35-001ENST000002991386780ENSP00000299138796Protein codingGenes and/or transcript that contains an open reading frame (ORF).CCDS10721YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
VPS35-002ENST000005687844017ENSP0000045627448Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. --
VPS35-008ENST00000568612697ENSP0000046146941Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. --
VPS35-005ENST00000561713589ENSP0000046142347Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. --
VPS35-012ENST00000568642447No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.-YThe GENCODE Basic set includes all genes in the GENCODE gene set but only a subset of the transcripts.
VPS35-003ENST000005699501096No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
VPS35-004ENST00000563984775No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
VPS35-006ENST00000563884759No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
VPS35-011ENST00000562420740No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
VPS35-007ENST00000568191520No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
VPS35-010ENST00000565228487No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Statistics

Exons: 17 Coding exons: 17 Transcript length: 6,780 bps Translation length: 796 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS10721

Ensembl version

ENST00000299138.7

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:
OTTHUMT00000255742 (version 3)
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays