Description

vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:13487]

Synonyms

FLJ10752, MEM3, PARK17

Location
About this transcript

This transcript has 17 exons, is annotated with 10 domains and features, is associated with 175 variations and maps to 58 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
VPS35-001ENST000002991386790796aaENSP00000299138
 
Protein coding
CCDS10721Q96QK1 NM_018206
NP_060676
TSL:1GENCODE basicAPPRIS P1
VPS35-002ENST00000568784401748aaENSP00000456274
 
Nonsense mediated decay
-H3BRJ7 -TSL:1
VPS35-008ENST0000056861269741aaENSP00000461469
 
Nonsense mediated decay
-I3L4S0 -TSL:5
VPS35-005ENST0000056171358947aaENSP00000461423
 
Nonsense mediated decay
-I3L4P4 -TSL:4
VPS35-012ENST00000568642447No protein-
 
Processed transcript
---TSL:3
VPS35-003ENST000005699501096No protein-
 
Retained intron
---TSL:5
VPS35-004ENST00000563984775No protein-
 
Retained intron
---TSL:2
VPS35-006ENST00000563884759No protein-
 
Retained intron
---TSL:2
VPS35-011ENST00000562420740No protein-
 
Retained intron
---TSL:2
VPS35-007ENST00000568191520No protein-
 
Retained intron
---TSL:4
VPS35-010ENST00000565228487No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 17 Coding exons: 17 Transcript length: 6,790 bps Translation length: 796 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS10721

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96QK1

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000299138.11

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays