Description

vacuolar protein sorting 35 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:HGNC:13487]

Synonyms

FLJ10752, MEM3, PARK17

Location
About this transcript

This transcript has 5 exons, is associated with 7 variations and maps to 9 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
VPS35-001ENST000002991386790796aaENSP00000299138
 
Protein coding
CCDS10721Q96QK1 NM_018206
NP_060676
TSL:1GENCODE basicAPPRIS P1
VPS35-002ENST00000568784401748aaENSP00000456274
 
Nonsense mediated decay
-H3BRJ7 -TSL:1
VPS35-008ENST0000056861269741aaENSP00000461469
 
Nonsense mediated decay
-I3L4S0 -TSL:5
VPS35-005ENST0000056171358947aaENSP00000461423
 
Nonsense mediated decay
-I3L4P4 -TSL:4
VPS35-012ENST00000568642447No protein-
 
Processed transcript
---TSL:3
VPS35-003ENST000005699501096No protein-
 
Retained intron
---TSL:5
VPS35-004ENST00000563984775No protein-
 
Retained intron
---TSL:2
VPS35-006ENST00000563884759No protein-
 
Retained intron
---TSL:2
VPS35-011ENST00000562420740No protein-
 
Retained intron
---TSL:2
VPS35-007ENST00000568191520No protein-
 
Retained intron
---TSL:4
VPS35-010ENST00000565228487No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 5 Coding exons: 3 Transcript length: 589 bps Translation length: 47 residues

Transcript Support Level (TSL)

TSL:4

Ensembl version

ENST00000561713.1

Type

Known nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays