Description

paired-like homeodomain 1 [Source:HGNC Symbol;Acc:HGNC:9004]

Synonyms

BFT, POTX, PTX1

Gene

This transcript is a product of gene ENSG00000069011

This gene has 6 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
PITX1-001ENST000002653402406 bp314 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4182D6R955 D6R9U1 P78337
X5D9A5
NM_002653
NP_002644
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PITX1-002ENST000005064381305 bp314 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS4182D6R955 D6R9U1 P78337
X5D9A5
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
PITX1-003ENST00000502676666 bp114 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6R955 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PITX1-005ENST00000503586624 bp208 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
PITX1-004ENST00000507253587 bp131 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D6R955 D6R9U1 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
PITX1-006ENST00000504936770 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 3 Coding exons: 3 Transcript length: 2,406 bps Translation length: 314 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS4182

Uniprot

This transcript corresponds to the following Uniprot identifiers: P78337

Ensembl version

ENST00000265340.8

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
Annotation Attributes

retained intron first [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays