Description

trophinin [Source:HGNC Symbol;Acc:HGNC:12326]

Synonyms

KIAA1114, MAGE-D3, MAGED3

Location
Gene

This transcript is a product of gene ENSG00000067445

This gene has 25 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
TRO-008ENST000001738984647 bp1431 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS43959B1AKE6 B1AKE7 B1AKF2
B1AKF3 B1AKF4 B1AKF5
B1AKF6 E7ERU6 Q12816
NM_001039705
NP_001034794
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TRO-201ENST000004207983613 bp962 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS59529Q12816 NM_001271183
NP_001258112
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TRO-009ENST000003750413488 bp1034 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS59528B1AKE8 Q12816 NM_001271184
NP_001258113
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TRO-017ENST000003191672326 bp706 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS43958B1AKE6 B1AKE7 B1AKF2
B1AKF3 B1AKF4 B1AKF5
B1AKF6 E7ERU6 Q12816
NM_016157
NP_057241
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TRO-010ENST000003750222306 bp706 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS43958B1AKE6 B1AKE7 B1AKF2
B1AKF3 B1AKF4 B1AKF5
B1AKF6 E7ERU6 Q12816
NM_177556
NP_808224
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TRO-011ENST000003997361115 bp309 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS59527B1AKE8 Q12816 NM_177557
NP_808225
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TRO-202ENST000006220171403 bp357 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AKE8 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
TRO-024ENST000004115341196 bp230 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AKF2 B1AKF3 B1AKF4
B1AKF5 B1AKF6 E7ERU6
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
TRO-004ENST00000452830976 bp71 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AKF2 B1AKF3 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
TRO-012ENST00000430420868 bp192 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AKF2 B1AKF3 B1AKF4
B1AKF5 E7ERU6
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
TRO-018ENST00000453081722 bp64 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AKF2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
TRO-015ENST00000440759672 bp176 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AKE6 B1AKE7 B1AKF2
B1AKF3 B1AKF4 E7ERU6
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
TRO-021ENST00000442098626 bp168 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AKE6 B1AKF2 B1AKF3
B1AKF4 E7ERU6
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
TRO-016ENST00000440072599 bp3 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
TRO-014ENST00000416704594 bp169 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AKE6 B1AKF2 B1AKF3
B1AKF4 E7ERU6
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
TRO-013ENST00000449980578 bp123 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AKF2 B1AKF3 B1AKF4
E7ERU6
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
TRO-006ENST00000427099562 bp121 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AKF2 B1AKF3 E7ERU6
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
TRO-019ENST00000431115405 bp102 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AKE8 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
TRO-001ENST000004455612597 bp681 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-B1AKE6 B1AKE7 B1AKF2
B1AKF3 B1AKF4 B1AKF5
B1AKF6 E7ERU6 G5E9N2
-
TRO-020ENST00000484031650 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
TRO-007ENST00000475183632 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
TRO-005ENST00000492142485 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
TRO-022ENST00000474933299 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
TRO-003ENST000004927063677 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
TRO-023ENST00000469211842 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 12 Coding exons: 10 Transcript length: 3,488 bps Translation length: 1,034 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS59528

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q12816

Ensembl version

ENST00000375041.3

Type

Novel protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays