Description

trophinin [Source:HGNC Symbol;Acc:HGNC:12326]

Synonyms

KIAA1114, MAGE-D3, MAGED3

Location
About this transcript

This transcript has 12 exons, is annotated with 17 domains and features, is associated with 311 variations and maps to 43 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
TRO-008ENST0000017389846471431aaENSP00000173898
 
Protein coding
CCDS43959Q12816 NM_001039705
NP_001034794
TSL:1GENCODE basicAPPRIS P4
TRO-201ENST000004207983613962aaENSP00000405126
 
Protein coding
CCDS59529Q12816 NM_001271183
NP_001258112
TSL:2GENCODE basicAPPRIS ALT2
TRO-009ENST0000037504134881034aaENSP00000364181
 
Protein coding
CCDS59528Q12816 NM_001271184
NP_001258113
TSL:1GENCODE basicAPPRIS ALT2
TRO-017ENST000003191672326706aaENSP00000318278
 
Protein coding
CCDS43958A0A024R9X0 Q12816 NM_016157
NP_057241
TSL:2GENCODE basicAPPRIS ALT2
TRO-010ENST000003750222306706aaENSP00000364162
 
Protein coding
CCDS43958A0A024R9X0 Q12816 NM_177556
NP_808224
TSL:1GENCODE basicAPPRIS ALT2
TRO-011ENST000003997361115309aaENSP00000382641
 
Protein coding
CCDS59527Q12816 NM_177557
NP_808225
TSL:1GENCODE basicAPPRIS ALT2
TRO-202ENST000006220171403357aaENSP00000483142
 
Protein coding
-A0A087X070 -TSL:5GENCODE basicAPPRIS ALT2
TRO-024ENST000004115341196230aaENSP00000388947
 
Protein coding
-B1AKF6 -CDS 3' incompleteTSL:2
TRO-004ENST0000045283097671aaENSP00000387676
 
Protein coding
-B1AKF3 -CDS 3' incompleteTSL:2
TRO-012ENST00000430420868192aaENSP00000411717
 
Protein coding
-B1AKF5 -CDS 3' incompleteTSL:5
TRO-018ENST0000045308172264aaENSP00000412588
 
Protein coding
-B1AKF2 -CDS 3' incompleteTSL:4
TRO-015ENST00000440759672176aaENSP00000406574
 
Protein coding
-B1AKE7 -CDS 3' incompleteTSL:4
TRO-021ENST00000442098626168aaENSP00000404645
 
Protein coding
-B1AKE6 -CDS 3' incompleteTSL:4
TRO-016ENST000004400725993aaENSP00000405043
 
Protein coding
---CDS 3' incompleteTSL:4
TRO-014ENST00000416704594169aaENSP00000404767
 
Protein coding
-B1AKE6 -CDS 3' incompleteTSL:4
TRO-013ENST00000449980578123aaENSP00000392841
 
Protein coding
-B1AKF4 -CDS 3' incompleteTSL:4
TRO-006ENST00000427099562121aaENSP00000405311
 
Protein coding
-E7ERU6 -CDS 3' incompleteTSL:3
TRO-019ENST00000431115405102aaENSP00000407996
 
Protein coding
-B1AKE8 -CDS 3' incompleteTSL:5
TRO-001ENST000004455612597681aaENSP00000404794
 
Nonsense mediated decay
-G5E9N2 -TSL:1
TRO-020ENST00000484031650No protein-
 
Processed transcript
---TSL:5
TRO-007ENST00000475183632No protein-
 
Processed transcript
---TSL:3
TRO-005ENST00000492142485No protein-
 
Processed transcript
---TSL:3
TRO-022ENST00000474933299No protein-
 
Processed transcript
---TSL:4
TRO-003ENST000004927063677No protein-
 
Retained intron
---TSL:2
TRO-023ENST00000469211842No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 12 Coding exons: 10 Transcript length: 3,488 bps Translation length: 1,034 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS59528

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q12816

Transcript Support Level (TSL)

TSL:1

Ensembl version

ENST00000375041.6

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays