Description

ataxin 3 [Source:HGNC Symbol;Acc:HGNC:7106]

Synonyms

ATX3, JOS, MJD, SCA3

Location
Gene

This transcript is a product of gene ENSG00000066427

This gene has 53 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
ATXN3-001ENST0000055819026812 bp361 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9900D3VVC1 D3VVD5 D3VVF1
D3VVJ0 D3VVL3 D3VVM7
G3V2G2 G3V4F4
NM_001164774
NM_001164779
NM_001164782
NM_004993
NP_001158246
NP_001158251
NP_001158254
NP_004984
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATXN3-005ENST000005037671315 bp346 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS45154C9JQV6 D3VVC1 D3VVD5
D3VVM2 G3V2G2 P54252
NM_001127696
NP_001121168
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATXN3-004ENST000005022501259 bp182 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS53908G3V2G2 P54252 NM_001164780
NP_001158252
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATXN3-003ENST000003406601205 bp306 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS32143D3VVK3 D3VVN9 G3V2G2
P54252
NM_030660
NP_109376
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATXN3-203ENST000005451706950 bp370 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3VVC1 D3VVD5 D3VVF1
D3VVJ0 D3VVL3 G3V4F4
NM_001164776
NM_001164777
NM_001164778
NP_001158248
NP_001158249
NP_001158250
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATXN3-201ENST000003932876770 bp310 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3VVC1 D3VVD5 G3V2G2
G3V4U9 P54252
NM_001127697
NM_001164774
NM_001164779
NM_001164782
NP_001121169
NP_001158246
NP_001158251
NP_001158254
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATXN3-202ENST000004297746713 bp291 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V2G2 G3V328 NM_001164774
NM_001164779
NM_001164781
NM_001164782
NP_001158246
NP_001158251
NP_001158253
NP_001158254
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATXN3-015ENST000005320321191 bp364 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3VVC1 D3VVD5 D3VVF1
D3VVJ0 D3VVL3 D3VVM7
G3V2G2 G3V4F4 P54252
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATXN3-204ENST000006177191074 bp301 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3VVC1 D3VVD5 D3VVF1
D3VVH9 D3VVJ0 D3VVL3
G3V4F4
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATXN3-205ENST000006205361044 bp324 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3VVC1 D3VVD5 D3VVF1
D3VVJ0 D3VVL3 G3V4F4
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATXN3-026ENST000005545921010 bp329 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3VVC1 D3VVD5 G3V2G2
G3V3R7
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
ATXN3-206ENST00000621269936 bp288 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3VVC1 D3VVD5 D3VVF1
D3VVJ0 G3V4F4
-GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
ATXN3-032ENST00000553491857 bp278 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3VVB0 D3VVB1 D3VVC1
D3VVD5 D3VVQ0 G3V4U9
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
ATXN3-017ENST00000555381803 bp260 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V2G2 G3V328 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
ATXN3-019ENST00000554672759 bp232 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V2G2 G3V3T6 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
ATXN3-029ENST00000556220692 bp223 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3VVP4 D3VVQ7 G3V2G1
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
ATXN3-008ENST00000506466637 bp205 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3VVC1 D3VVD5 E9PJN5
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
ATXN3-014ENST00000526872597 bp199 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-S4R399 -CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
ATXN3-020ENST00000557311562 bp151 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V2G2 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
ATXN3-002ENST000003593662584 bp79 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3VVC1 D3VVD5 D3VVP3
-
ATXN3-031ENST000005563741083 bp114 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3VVC1 D3VVD5 G3V3S5
-
ATXN3-024ENST000005534881065 bp79 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3VVC1 D3VVD5 D3VVP3
-
ATXN3-028ENST00000556898990 bp159 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3VVC1 D3VVD5 D3VVF1
D3VVJ0 G3V4F4
-
ATXN3-022ENST00000554673981 bp161 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3VVC1 D3VVD5 D3VVF1
D3VVJ0 G3V5H3
-
ATXN3-043ENST00000554350943 bp110 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3VVC1 D3VVD5 D3VVF1
G3V390
-
ATXN3-027ENST00000556315924 bp78 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3VVC1 D3VVD5 G3V3A6
-
ATXN3-040ENST00000554994922 bp150 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3VVC1 D3VVD5 D3VVF1
G3V4F5
-
ATXN3-042ENST00000556671921 bp110 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3VVC1 D3VVD5 G3V4B1
-
ATXN3-036ENST00000556274913 bp79 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3VVC1 D3VVD5 D3VVP3
-
ATXN3-035ENST00000556288901 bp79 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3VVC1 D3VVD5 D3VVP3
-
ATXN3-047ENST00000557030807 bp200 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3VVC1 D3VVD5 G3V526
-
ATXN3-030ENST00000556958769 bp99 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3VVC1 D3VVD5 D6R9I5
-
ATXN3-021ENST00000555816760 bp79 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3VVC1 D3VVD5 D3VVP3
-
ATXN3-039ENST00000553570757 bp95 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-G3V3T0 -
ATXN3-049ENST00000556082660 bp79 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3VVC1 D3VVD5 D3VVP3
-
ATXN3-007ENST00000515746619 bp99 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D3VVC1 D3VVD5 D6R9I5
-
ATXN3-046ENST000005544911064 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
ATXN3-045ENST000005533091022 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
ATXN3-048ENST00000553498911 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
ATXN3-033ENST00000553686869 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
ATXN3-038ENST00000555958857 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
ATXN3-034ENST00000554214771 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
ATXN3-044ENST00000553287726 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
ATXN3-051ENST00000568290671 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
ATXN3-050ENST00000564606645 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
ATXN3-025ENST00000554040592 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
ATXN3-012ENST00000511362591 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
ATXN3-037ENST00000556339525 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
ATXN3-011ENST00000504047426 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
ATXN3-023ENST00000556644372 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
ATXN3-013ENST00000526245352 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
ATXN3-010ENST00000507965708 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
ATXN3-006ENST00000454964598 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 10 Coding exons: 10 Transcript length: 1,205 bps Translation length: 306 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS32143

Uniprot

This transcript corresponds to the following Uniprot identifiers: P54252

Ensembl version

ENST00000340660.7

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays