Description

POU class 1 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9210]

Synonyms

GHF-1, PIT1, POU1F1a

Location
Gene

This transcript is a product of gene ENSG00000064835

This gene has 4 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtRefSeqFlags
POU1F1-001ENST000003503751491291 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS2919P28069 NM_000306
NP_000297
TSL:1

TSL1: All splice junctions of the transcript are supported by at least one non-suspect mRNA.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS PIAPPRIS principal isoform
Glossary entry for APPRIS
APPRIS website
POU1F1-002ENST000003442651149317 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS46873P28069 NM_001122757
NP_001116229
TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
POU1F1-004ENST00000561167650216 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YNM5 -CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

POU1F1-003ENST00000560656647169 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H0YK06 -TSL:5

TSL5: No single transcript (mRNA or EST) supports this transcript model's structure.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
Statistics

Exons: 6 Coding exons: 6 Transcript length: 1,149 bps Translation length: 317 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS46873

Uniprot

This transcript corresponds to the following Uniprot identifiers: P28069

Transcript Support Level

5

Ensembl version

ENST00000344265.5

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays