Description

goosecoid homeobox 2 [Source:HGNC Symbol;Acc:HGNC:4613]

Synonyms

GSCL

Location
About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 33 variations and maps to 15 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
GSC2-001ENST000000869331033205aaENSP00000086933
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS13757O15499 NM_005315
NP_005306
TSL:5

Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.

The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.

GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).APPRIS P1

PRINCIPAL1 - APPRIS candidate principal isoform.

APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.

Statistics

Exons: 3 Coding exons: 3 Transcript length: 1,033 bps Translation length: 205 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS13757

Uniprot

This transcript corresponds to the following Uniprot identifiers: O15499

Transcript Support Level (TSL)

TSL:5

Ensembl version

ENST00000086933.2

Type

Known protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays