Description

galactosylceramidase [Source:HGNC Symbol;Acc:HGNC:4115]

Location
About this transcript

This transcript has 6 exons, is associated with 27 variations and maps to 9 oligo probes.

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtRefSeqFlags
GALC-001ENST000002613043883685aaENSP00000261304
 
Protein coding
CCDS9878A0A0A0MQV0 NM_000153
NP_000144
TSL:1GENCODE basicAPPRIS P1
GALC-002ENST000003935692547659aaENSP00000377199
 
Protein coding
CCDS55937A0A0A0MS42 NM_001201402
NP_001188331
TSL:2GENCODE basic
GALC-005ENST000003935682054662aaENSP00000377198
 
Protein coding
CCDS55936E7EPA4 NM_001201401
NP_001188330
TSL:2GENCODE basic
GALC-007ENST000005448072528589aaENSP00000437513
 
Protein coding
-P54803 -TSL:2GENCODE basic
GALC-017ENST000006222641221404aaENSP00000480649
 
Protein coding
-A0A087WX10 -CDS 5' incompleteTSL:1
GALC-008ENST000005550002067434aaENSP00000450472
 
Nonsense mediated decay
-G3V255 -TSL:2
GALC-006ENST000005573161874211aaENSP00000452314
 
Nonsense mediated decay
-G3V5E8 -TSL:5
GALC-009ENST00000554372717112aaENSP00000451884
 
Nonsense mediated decay
-G3V4M2 -TSL:5
GALC-010ENST0000055687959562aaENSP00000452208
 
Nonsense mediated decay
-H0YJV6 -CDS 5' incompleteTSL:4
GALC-014ENST0000055517955472aaENSP00000451480
 
Nonsense mediated decay
-H0YJG8 -CDS 5' incompleteTSL:3
GALC-011ENST00000554916631No protein-
 
Processed transcript
---TSL:5
GALC-012ENST00000556261567No protein-
 
Processed transcript
---TSL:3
GALC-016ENST00000557520408No protein-
 
Processed transcript
---TSL:3
GALC-003ENST000004742941263No protein-
 
Retained intron
---TSL:1
GALC-013ENST00000477716605No protein-
 
Retained intron
---TSL:4
GALC-015ENST00000555956525No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 6 Coding exons: 2 Transcript length: 595 bps Translation length: 62 residues

Transcript Support Level (TSL)

TSL:4

Ensembl version

ENST00000556879.5

Type

Known nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:

Transcript-based displays