Description

galactosylceramidase [Source:HGNC Symbol;Acc:HGNC:4115]

Synonyms

Location
Gene

This transcript is a product of gene ENSG00000054983

This gene has 16 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtRefSeqFlags
GALC-001ENST000002613043883 bp685 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS9878-NM_000153
NP_000144
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
GALC-002ENST000003935692547 bp659 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS55937-NM_001201402
NP_001188331
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
GALC-005ENST000003935682054 bp662 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS55936E7EPA4 NM_001201401
NP_001188330
GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
GALC-007ENST000005448072528 bp589 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3V255 P54803 -GENCODE basicThe GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).
GALC-017ENST000006222641221 bp404 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
GALC-008ENST000005550002067 bp434 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-G3V255 -
GALC-006ENST000005573161874 bp211 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-G3V5E8 -
GALC-009ENST00000554372717 bp112 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-G3V4M2 -
GALC-010ENST00000556879595 bp62 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H0YJV6 -CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
GALC-014ENST00000555179554 bp72 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
---CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
GALC-011ENST00000554916631 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
GALC-012ENST00000556261567 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
GALC-016ENST00000557520408 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
---
GALC-003ENST000004742941263 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
GALC-013ENST00000477716605 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
GALC-015ENST00000555956525 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
---
Statistics

Exons: 17 Coding exons: 17 Transcript length: 2,547 bps Translation length: 659 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS55937

Ensembl version

ENST00000393569.3

Type

Known protein coding

Prediction Method

Transcript where the Ensembl genebuild transcript and the Vega manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays